Berriman, Thomas: search on Z-Library

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1

Schistosome sex matters: a deep view into gonad-specific and pairing-dependent transcriptomes reveals a complex gender interplay

Lu, Zhigang, Sessler, Florian, Holroyd, Nancy, Hahnel, Steffen, Quack, Thomas, Berriman, Matthew, Grevelding, Christoph G.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 2.18 MB

english, 2016

2

SPIE Proceedings [SPIE Astronomical Telescopes and Instrumentation - Glasgow, Scotland (Monday 21 June 2004)] Optimizing Scientific Return for Astronomy through Information Technologies - Montage: a grid-enabled engine for delivering custom science-grade mosaics on demand

Berriman, G. B., Deelman, Ewa, Good, John C., Jacob, Joseph C., Katz, Daniel S., Kesselman, Carl, Laity, Anastasia C., Prince, Thomas A., Singh, Gurmeet, Su, Mei-Hu, Quinn, Peter J., Bridger, Alan

Year:

2004

Language:

english

File:

PDF, 848 KB

english, 2004

3

A comprehensive evaluation of assembly scaffolding tools

Hunt, Martin, Newbold, Chris, Berriman, Matthew, Otto, Thomas D

Journal:

Year:

2014

Language:

english

File:

PDF, 543 KB

english, 2014

4

Science applications of the Montage image mosaic engine

Berriman, G. Bruce, Laity, Anastasia C., Good, John C., Katz, Daniel S., Jacob, Joseph C., Deelman, Ewa, Singh, Gurmeet, Su, Mei-Hu, Prince, Thomas A.

Journal:

Proceedings of the International Astronomical Union

Year:

2006

Language:

english

File:

PDF, 42 KB

english, 2006

5

SPIE Proceedings [SPIE SPIE Astronomical Telescopes + Instrumentation - Amsterdam, Netherlands (Sunday 1 July 2012)] Observatory Operations: Strategies, Processes, and Systems IV - Running a distributed virtual observatory: U.S. Virtual Astronomical Observatory operations

McGlynn, Thomas A., Peck, Alison B., Seaman, Robert L., Hanisch, Robert J., Berriman, G. Bruce, Comeron, Fernando, Thakar, Aniruddha R.

Year:

2012

Language:

english

File:

PDF, 218 KB

english, 2012

6

New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq

Thomas D. Otto, Daniel Wilinski, Sammy Assefa, Thomas M. Keane, Louis R. Sarry, Ulrike Böhme, Jacob Lemieux, Bart Barrell, Arnab Pain, Matthew Berriman, Chris Newbold, Manuel Llinás

Journal:

Molecular Microbiology

Year:

2010

Language:

english

File:

PDF, 512 KB

english, 2010

7

Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

Isheng J Tsai, Thomas D Otto, Matthew Berriman

Journal:

Year:

2010

Language:

english

File:

PDF, 1.64 MB

english, 2010

8

Refining the transcriptome of the human malaria parasite Plasmodium falciparum using amplification-free RNA-seq

Chappell, Lia, Ross, Philipp, Orchard, Lindsey, Russell, Timothy J., Otto, Thomas D., Berriman, Matthew, Rayner, Julian C., LlinÃ¡s, Manuel

Journal:

Year:

2020

File:

PDF, 3.82 MB

2020

9

A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

Swain, Martin T, Tsai, Isheng J, Assefa, Samual A, Newbold, Chris, Berriman, Matthew, Otto, Thomas D

Journal:

Nature Protocols

Year:

2012

Language:

english

File:

PDF, 2.75 MB

english, 2012

10

Genome-wide profiling of chromosome interactions in Plasmodium falciparum characterizes nuclear architecture and reconfigurations associated with antigenic variation

Lemieux, Jacob E., Kyes, Sue A., Otto, Thomas D., Feller, Avi I., Eastman, Richard T., Pinches, Robert A., Berriman, Matthew, Su, Xin-zhuan, Newbold, Chris I.

Journal:

Molecular Microbiology

Year:

2013

Language:

english

File:

PDF, 10.10 MB

english, 2013

11

136 Long term efficacy of catheter ablation for AF: impact of additional targeting of fractionated electrograms

Hunter, R J, Berriman, T J, Diab, I, Baker, V, Finlay, M, Richmond, L, Duncan, E, Kamdar, R, Thomas, G, Abrams, D, Dhinoja, M, Earley, M J, Sporton, S, Schilling, R J

Journal:

Year:

2010

Language:

english

File:

PDF, 68 KB

english, 2010

12

SPIE Proceedings [SPIE SPIE's 1993 International Symposium on Optics, Imaging, and Instrumentation - San Diego, CA (Sunday 11 July 1993)] Infrared Spaceborne Remote Sensing - Investigation of the zodiacal light from 1 to 240 μm using COBE DIRBE data

Kelsall, Thomas J., Hauser, Michael G., Berriman, G. Bruce, Boggess, Nancy W., Moseley, Samuel H., Murdock, Thomas L., Silverberg, Robert F., Spiesman, W. J., Weiland, J. L., Scholl, Marija S.

Year:

1993

Language:

english

File:

PDF, 862 KB

english, 1993

13

Genomic Characterization of Recrudescent Plasmodium malariae after Treatment with Artemether/Lumefantrine

Rutledge, Gavin G., Marr, Ian, Huang, G. Khai Lin, Auburn, Sarah, Marfurt, Jutta, Sanders, Mandy, White, Nicholas J., Berriman, Matthew, Newbold, Chris I., Anstey, Nicholas M., Otto, Thomas D., Price,

Journal:

Emerging Infectious Diseases

Year:

2017

Language:

english

File:

PDF, 3.39 MB

english, 2017

14

SPIE Proceedings [SPIE SPIE's 1993 International Symposium on Optics, Imaging, and Instrumentation - San Diego, CA (Sunday 11 July 1993)] Infrared Spaceborne Remote Sensing - Observations of the large-scale infrared emission from the galactic plane region by the diffuse infrared background experiment

Sodroski, Thomas J., Arendt, Richard G., Hauser, Michael G., Boggess, Nancy W., Dwek, Eli, Kelsall, Thomas J., Moseley, Samuel H., Murdock, Thomas L., Silverberg, Robert F., Berriman, G. Bruce, Franz,

Year:

1993

Language:

english

File:

PDF, 435 KB

english, 1993

15

Problems in hospital law (fourth edition)

Berriman, Thomas R.

Journal:

Journal of Legal Medicine

Year:

1983

Language:

english

File:

PDF, 569 KB

english, 1983

16

The exported chaperone Hsp70-x supports virulence functions for Plasmodium falciparum blood stage parasites

Charnaud, Sarah C., Dixon, Matthew W. A., Nie, Catherine Q., Chappell, Lia, Sanders, Paul R., Nebl, Thomas, Hanssen, Eric, Berriman, Matthew, Chan, Jo-Anne, Blanch, Adam J., Beeson, James G., Rayner,

Journal:

Year:

2017

Language:

english

File:

PDF, 6.28 MB

english, 2017

17

Montage: a grid portal and software toolkit for science-grade astronomical image mosaicking

Jacob, Joseph C., Katz, Daniel S., Berriman, G. Bruce, Good, John C., Laity, Anastasia C., Deelman, Ewa, Kesselman, Carl, Singh, Gurmeet, Su, Mei Hui, Prince, Thomas A., Williams, Roy

Journal:

International Journal of Computational Science and Engineering

Year:

2009

Language:

english

File:

PDF, 537 KB

english, 2009

18

Multi-wavelength image space: another Grid-enabled science

Roy Williams, Bruce Berriman, Ewa Deelman, John Good, Joseph Jacob, Carl Kesselman, Carol Lonsdale, Seb Oliver, Thomas A. Prince

Journal:

Concurrency and Computation: Practice and Experience

Year:

2003

Language:

english

File:

PDF, 210 KB

english, 2003

19

Companion : a web server for annotation and analysis of parasite genomes

Steinbiss, Sascha, Silva-Franco, Fatima, Brunk, Brian, Foth, Bernardo, Hertz-Fowler, Christiane, Berriman, Matthew, Otto, Thomas D.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 863 KB

english, 2016

20

Efficient Depletion of Host DNA Contamination in Malaria Clinical Sequencing

Oyola, Samuel O., Gu, Yong, Manske, Magnus, Otto, Thomas D., O'Brien, John, Alcock, Daniel, MacInnis, Bronwyn, Berriman, Matthew, Newbold, Chris I., Kwiatkowski, Dominic P., Swerdlow, Harold P., Quail

Journal:

Journal of Clinical Microbiology

Year:

2013

Language:

english

File:

PDF, 1.22 MB

english, 2013

21

pfk13 -Independent Treatment Failure in Four Imported Cases of Plasmodium falciparum Malaria Treated with Artemether-Lumefantrine in the United Kingdom

Sutherland, Colin J., Lansdell, Paul, Sanders, Mandy, Muwanguzi, Julian, van Schalkwyk, Donelly A., Kaur, Harparkash, Nolder, Debbie, Tucker, Julie, Bennett, Hayley M., Otto, Thomas D., Berriman, Matt

Journal:

Antimicrobial Agents and Chemotherapy

Year:

2017

Language:

english

File:

PDF, 449 KB

english, 2017

22

Long-term efficacy of catheter ablation for atrial fibrillation: impact of additional targeting of fractionated electrograms

Hunter, R. J., Berriman, T. J., Diab, I., Baker, V., Finlay, M., Richmond, L., Duncan, E., Kamdar, R., Thomas, G., Abrams, D., Dhinoja, M., Sporton, S., Earley, M. J., Schilling, R. J.

Journal:

Heart (BMJ Pub. Group)

Year:

2010

Language:

english

File:

PDF, 450 KB

english, 2010

23

A prospective comparison of echocardiography and device algorithms for atrioventricular and interventricular interval optimization in cardiac resynchronization therapy

Kamdar, R., Frain, E., Warburton, F., Richmond, L., Mullan, V., Berriman, T., Thomas, G., Tenkorang, J., Dhinoja, M., Earley, M., Sporton, S., Schilling, R.

Journal:

Year:

2010

Language:

english

File:

PDF, 335 KB

english, 2010

24

Whole genome resequencing of the human parasite Schistosoma mansoni reveals population history and effects of selection

Crellen, Thomas, Allan, Fiona, David, Sophia, Durrant, Caroline, Huckvale, Thomas, Holroyd, Nancy, Emery, Aidan M., Rollinson, David, Aanensen, David M., Berriman, Matthew, Webster, Joanne P., Cotton,

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.04 MB

english, 2016

25

A gene expression atlas of adult Schistosoma mansoni and their gonads

Lu, Zhigang, Sessler, Florian, Holroyd, Nancy, Hahnel, Steffen, Quack, Thomas, Berriman, Matthew, Grevelding, Christoph G.

Journal:

Scientific Data

Year:

2017

Language:

english

File:

PDF, 1.73 MB

english, 2017

26

Learning from FITS: Limitations in use in modern astronomical research

Thomas, B., Jenness, T., Economou, F., Greenfield, P., Hirst, P., Berry, D.S., Bray, E., Gray, N., Muna, D., Turner, J., de Val-Borro, M., Santander-Vela, J., Shupe, D., Good, J., Berriman, G.B., Kita

Journal:

Astronomy and Computing

Year:

2015

Language:

english

File:

PDF, 825 KB

english, 2015

27

[BMJ Publishing Group Ltd and British Society of Gastroenterology British Society of Gastroenterology Annual Meeting, 17â20 June 2019, Abstracts - ()] Posters - PTH-006âComplexity of polyps identified via bowel screening programme in NHS greater glasgow and clyde

Berriman, Thomas, Brownson, Emily, Pace, Lynn, Morris, Judith, Winter, Jack Westwood

Year:

2019

File:

PDF, 59 KB

2019

28

RNAseq Analysis of the Parasitic Nematode Strongyloides stercoralis Reveals Divergent Regulation of Canonical Dauer Pathways

Stoltzfus, Jonathan D., Minot, Samuel, Berriman, Matthew, Nolan, Thomas J., Lok, James B., Jex, Aaron R.

Journal:

PLoS Neglected Tropical Diseases

Year:

2012

Language:

english

File:

PDF, 1.84 MB

english, 2012

29

Proteomic and Genetic Analyses Demonstrate that Plasmodium berghei Blood Stages Export a Large and Diverse Repertoire of Proteins

Pasini, E. M., Braks, J. A., Fonager, J., Klop, O., Aime, E., Spaccapelo, R., Otto, T. D., Berriman, M., Hiss, J. A., Thomas, A. W., Mann, M., Janse, C. J., Kocken, C. H. M., Franke-Fayard, B.

Journal:

Molecular & Cellular Proteomics

Year:

2013

Language:

english

File:

PDF, 767 KB

english, 2013

30

SPIE Proceedings [SPIE Astronomical Telescopes and Instrumentation - Waikoloa, HI (Thursday 22 August 2002)] Virtual Observatories - Architecture for access to a compute-intensive image mosaic service in the NVO

Berriman, G. Bruce, Curkendall, David, Good, John C., Jacob, Joseph C., Katz, Daniel S., Kong, Mihseh, Monkewitz, Serge, Moore, Reagan, Prince, Thomas A., Williams, Roy E., Szalay, Alexander S.

Year:

2002

Language:

english

File:

PDF, 760 KB

english, 2002

31

Characterization and gene expression analysis of thecirmulti-gene family ofplasmodium chabaudi chabaudi(AS)

Lawton, Jennifer, Brugat, Thibaut, Yan, Yam, Reid, Adam, Böhme, Ulrike, Otto, Thomas, Pain, Arnab, Jackson, Andrew, Berriman, Matthew, Cunningham, Deirdre, Preiser, Peter, Langhorne, Jean

Journal:

Year:

2012

Language:

english

File:

PDF, 687 KB

english, 2012

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